BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F04SP1|AL426067
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1639 0.0
>3x_Contig1677
Length = 15081
Score = 1639 bits (823), Expect = 0.0
Identities = 839/847 (99%), Gaps = 1/847 (0%)
Strand = Plus / Minus
Query: 1 gatctatattgagtccatgaataccagtagcagtaccaatgagaggaccaccacattgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12766 gatctatattgagtccatgaataccagtagcagtaccaatgagaggaccaccacattgag 12707
Query: 61 ggtcattagcacatacgtcaaagttgttaatttcgcatactgcactaatgttctgattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12706 ggtcattagcacatacgtcaaagttgttaatttcgcatactgcactaatgttctgattta 12647
Query: 121 ctggcgatagattggaatgttggaaatttagtgaatgcgaaggtatcatggcattagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12646 ctggcgatagattggaatgttggaaatttagtgaatgcgaaggtatcatggcattagcat 12587
Query: 181 gactagtattatgttgttgatgaagatggttattattagtattaacggatgaagtattag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12586 gactagtattatgttgttgatgaagatggttattattagtattaacggatgaagtattag 12527
Query: 241 cattagaatggtcattattattggttgaagtaccaaatatttggttcatgtcaatgaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12526 cattagaatggtcattattattggttgaagtaccaaatatttggttcatgtcaatgaaat 12467
Query: 301 cttgtataggctccttggccaagttggacgaataaagtggcacagaactgatcgcgttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12466 cttgtataggctccttggccaagttggacgaataaagtggcacagaactgatcgcgttca 12407
Query: 361 tattgtgagagtttgtactgggagtvgccgttgtaatgggagtctttacagacgtcatta 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 12406 tattgtgagagtttgtactgggagtagccgttgtaatgggagtctttacagacgtcatta 12347
Query: 421 tactcatatttggggacgaatgcgtagaagatgcagaaccagcmttatggtacattagat 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 12346 tactcatatttggggacgaatgcgtagaagatgcagaaccagcattatggtacattagat 12287
Query: 481 tactgttgatgttttggtgaggggtatgttgagcactttgagaactcgtttggtgtttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12286 tactgttgatgttttggtgaggggtatgttgagcactttgagaactcgtttggtgtttct 12227
Query: 541 gggaaamtgtaagtggaatcatgccttggcctgtcaccacatcatgtcgattatttttga 600
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12226 gggaaaatgtaagtggaatcatgccttggcctgtaaccacatcatgtcgattatttttga 12167
Query: 601 mgtgaggcaaaggtttactgaagaactccgtgaagtcaatttcattttgcacgttgaaat 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12166 agtgaggcaaaggtttactgaagaactccgtgaagtcaatttcattttgcacgttgaaat 12107
Query: 661 agttcgagttgaagtttgagaagttaggtgaatccatctgttgcgaagaagcagtattcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12106 agttcgagttgaagtttgagaagttaggtgaatccatctgttgcgaagaagcagtattcg 12047
Query: 721 gcaagaaatcagttgagtwaatattctcttgaggcgttagggccaagtttgaattcaggt 780
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12046 gcaagaaatcagttgagtaaatattctcttgaggcgttagggccaagtttgaattcaggt 11987
Query: 781 tagaagtcacagatggagcwactgaaacattttgattgggaatcgaactgtaaattcaac 840
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 11986 tagaagtcacagatggagctactgaaaca-tttgattgggaatcgaactgtaaattcaac 11928
Query: 841 gaattct 847
|||||||
Sbjct: 11927 gaattct 11921
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5722
Number of Sequences: 1807
Number of extensions: 5722
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)